Biobrick Restriction Enzyme

From 2007.igem.org

(Difference between revisions)
Line 11: Line 11:
  3'---CTTAA    G---5'
  3'---CTTAA    G---5'
|-
|-
-
|[[XbaI|''Xba''I]]<ref name=h/>||''[[Xanthomonas badrii]]''
+
|[[XbaI|''Xba''I]]||''[[Xanthomonas badrii]]''
|
|
  5'TCTAGA
  5'TCTAGA
Line 21: Line 21:
|colspan=4|* = blunt ends
|colspan=4|* = blunt ends
|-
|-
-
|[[PstI|''Pst''I]]<ref name=h/>||''[[Providencia stuartii]]''
+
|[[PstI|''Pst''I]]||''[[Providencia stuartii]]''
|
|
  5'CTGCAG
  5'CTGCAG
Line 28: Line 28:
  5'---CTGCA  G---3'
  5'---CTGCA  G---3'
  3'---G  ACGTC---5'
  3'---G  ACGTC---5'
 +
|-
 +
|[[SpeI|''SpeI''I]]||''[[]]''
 +
|
 +
5'
 +
3'
 +
|
 +
5'---  ---3'
 +
3'---  ---5'
|-
|-
|}
|}

Revision as of 12:46, 20 September 2007

We have selected and for promoters and coding sequences insertion. Restriction enzymes are named based on the bacteria in which they are isolated in the following manner.

EnzymeSourceRecognition SequenceCut
EcoRIEscherichia coli
5'GAATTC
3'CTTAAG
5'---G     AATTC---3'
3'---CTTAA     G---5'
XbaIXanthomonas badrii
5'TCTAGA
3'AGATCT
5'---T  CTAGA---3'
3'---AGATC  T---5'
* = blunt ends
PstIProvidencia stuartii
5'CTGCAG
3'GACGTC
5'---CTGCA  G---3'
3'---G  ACGTC---5'
SpeII[[]]
5'
3'
5'---  ---3'
3'---  ---5'