From 2007.igem.org

Home | Background Information | Current Project: Solving the Hamiltonian Path Problem in vivo | Mathematical Modeling | Gene Splitting | Traveling Salesperson Problem | Software | Resources and Citations

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We have written computer software to help us with our projects.

• [http://gcat.davidson.edu/IGEM06/oligo.html Oligo Cuts Optimization Program (Lance Harden, iGEM 2006)]
• Gene Splitter ([http://gcat.davidson.edu/iGEM07/genesplitting_source.txt source])
• Matlab programs:

1. [http://gcat.davidson.edu/iGEM07/For_Missouri_Western/fliplength.m FlipLength],
2. [http://gcat.davidson.edu/iGEM07/For_Missouri_Western/pureflip.m PureFlip],
3. [http://gcat.davidson.edu/iGEM07/For_Missouri_Western/biasweighter.m BiasWeighter],
4. [http://gcat.davidson.edu/iGEM07/For_Missouri_Western/fpVTgraph.m False positives for an 8 edge / 5 node graph],
5. [http://gcat.davidson.edu/iGEM07/For_Missouri_Western/davidson85Iweighter.m Counter Program for an 8 edge / 5 node graph],
6. [http://gcat.davidson.edu/iGEM07/For_Missouri_Western/adelman147.m Adelman's false positives with 14 edges / 7 nodes],
7. [http://gcat.davidson.edu/iGEM07/For_Missouri_Western/fpweighter.m Counter Program for Adelman's False Positives].