Edinburgh/SBCode
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********** MODEL NAME | ********** MODEL NAME | ||
- | Model of the Division PoPer Construct of Edinburgh iGEM 2007 Team | + | Model of the Division PoPer Construct of Edinburgh iGEM 2007 Team |
- | ********** MODEL NOTES | + | ********** MODEL NOTES |
- | The model represents the Division PoPper construct with the addition of a reporter protein placed downstream | + | The model represents the Division PoPper construct with the addition of a reporter protein placed downstream |
********** MODEL STATES | ********** MODEL STATES |
Revision as of 14:17, 24 October 2007
********** MODEL NAME Model of the Division PoPer Construct of Edinburgh iGEM 2007 Team
********** MODEL NOTES
The model represents the Division PoPper construct with the addition of a reporter protein placed downstream
- MODEL STATES
d/dt(YFP) = YFPexp*ForwardPhase(time)-YFPdeg*YFP d/dt(GFP) = GFPexp*BackwardPhase(time)-GFPdeg*GFP d/dt(YFP) =
YFP(0) = 0 GFP(0) = 0
- MODEL PARAMETERS
YFPexp = 0.0001 GFPexp = 0.0001 GFPdeg = 0.05 YFPdeg = 0.05
- MODEL VARIABLES
- MODEL REACTIONS
- MODEL FUNCTIONS
- MODEL EVENTS
- MODEL MATLAB FUNCTIONS
function [result] = ForwardPhase(t) FlippingTime=10; DivisionTime=40; temp=0; temp = mod(t,2*DivisionTime+2*FlippingTime); if temp < (DivisionTime)
result=1;
else result=0; end return
function [result] = BackwardPhase(t) FlippingTime=10; DivisionTime=40; temp=0; temp = mod(t,2*DivisionTime+2*FlippingTime); if temp > (DivisionTime+FlippingTime)
if temp < (2*DivisionTime+FlippingTime) result=1; else result=0; end else result=0;
end return