Tianjin/DIODE

From 2007.igem.org

(Difference between revisions)
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We use ODEs to simulate the system. The experiment has not finished yet,so we give the parameters manually. After the experiment,we will reset these given parameters.In the model we assume that the flux of each pipeline is the same and that the block stays a stable state.
We use ODEs to simulate the system. The experiment has not finished yet,so we give the parameters manually. After the experiment,we will reset these given parameters.In the model we assume that the flux of each pipeline is the same and that the block stays a stable state.
The simulation result is as follows:<br>
The simulation result is as follows:<br>
 +
<br>
 +
<br>
Amplifier <br>
Amplifier <br>
1.relation between the input concentration of the amplifier and the output concentration of the amplifier <br>
1.relation between the input concentration of the amplifier and the output concentration of the amplifier <br>
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2.relation between the flux of the amplifier and the output concentration of the amplifier<br>
2.relation between the flux of the amplifier and the output concentration of the amplifier<br>
[[Image:TJU1DM002.jpg|370px]]<br>
[[Image:TJU1DM002.jpg|370px]]<br>
 +
<br>
 +
<br>
Block <br>
Block <br>
1.relation between the input concentration of the block and the output concentration of the block <br>
1.relation between the input concentration of the block and the output concentration of the block <br>
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4.relation between the flux of the block and the output concentration of the block in different concentration of AIIA<br>
4.relation between the flux of the block and the output concentration of the block in different concentration of AIIA<br>
[[Image:TJU1DM006.jpg|370px]]<br>
[[Image:TJU1DM006.jpg|370px]]<br>
 +
<br>
 +
<br>
flow direction from amplifier to block<br>
flow direction from amplifier to block<br>
1.relation between the concentration and the flux at different proportion between the volume of the ampilier and the volume of the block.(the left image is a part of the left image)<br>
1.relation between the concentration and the flux at different proportion between the volume of the ampilier and the volume of the block.(the left image is a part of the left image)<br>
[[Image:TJU1DM007.jpg|370px]][[Image:TJU1DM008.jpg|370px]]<br>
[[Image:TJU1DM007.jpg|370px]][[Image:TJU1DM008.jpg|370px]]<br>
-
flow direction from block to amplifier()<br>
+
<br>
 +
<br>
 +
flow direction from block to amplifier(breakdown)<br>
 +
1.relation between the concentration and the input concentration at different proportion betweeen the volume of the amplifier and the volume of the block.(the concentretion contains two curves,the amplifier(the output concentration) and the block)<br>
 +
[[Image:TJU1DM009.jpg|370px]]<br>
 +
2.relation between the concentration and the input concentration at different concentration of AIIA.(the concentretion contains two curves,the amplifier(the output concentration) and the block)<br>
 +
[[Image:TJU1DM010.jpg|370px]]<br>
 +
3.relation between the concentration and the input concentration at different flux.(the concentretion contains two curves,the amplifier(the output concentration) and the block)<br>
 +
[[Image:TJU1DM011.jpg|370px]]<br>
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<gallery>
 
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Image:TJU1DM001.jpg|[[Tianjin/DIODE/TJU1DM001|amplifier:concentration in & concentration out]]
 
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Image:TJU1DM002.jpg|[[Tianjin/DIODE/TJU1DM002|amplifier:flux & concentration out]]
 
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Image:TJU1DM003.jpg|[[Tianjin/DIODE/TJU1DM003| ]]
 
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Image:TJU1DM004.jpg|[[Tianjin/DIODE/TJU1DM004| ]]
 
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Image:TJU1DM005.jpg|[[Tianjin/DIODE/TJU1DM005| ]]
 
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Image:TJU1DM006.jpg|[[Tianjin/DIODE/TJU1DM006| ]]
 
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Image:TJU1DM007.jpg|[[Tianjin/DIODE/TJU1DM007| ]]
 
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Image:TJU1DM008.jpg|[[Tianjin/DIODE/TJU1DM008| ]]
 
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</gallery>
 
|}
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Revision as of 10:16, 8 August 2007

Design

TJU1DD001.gif

TJU1DD001.jpg

Experiment

TJU1DE001.jpg

Modeling

We use ODEs to simulate the system. The experiment has not finished yet,so we give the parameters manually. After the experiment,we will reset these given parameters.In the model we assume that the flux of each pipeline is the same and that the block stays a stable state. The simulation result is as follows:


Amplifier
1.relation between the input concentration of the amplifier and the output concentration of the amplifier
TJU1DM001.jpg
2.relation between the flux of the amplifier and the output concentration of the amplifier
TJU1DM002.jpg


Block
1.relation between the input concentration of the block and the output concentration of the block
TJU1DM003.jpg
2.relation between the flux of the block and the output concentration of the block
TJU1DM004.jpg
3.relation between the concentration of AIIA in the block and the output concentration of the block
TJU1DM005.jpg
4.relation between the flux of the block and the output concentration of the block in different concentration of AIIA
TJU1DM006.jpg


flow direction from amplifier to block
1.relation between the concentration and the flux at different proportion between the volume of the ampilier and the volume of the block.(the left image is a part of the left image)
TJU1DM007.jpgTJU1DM008.jpg


flow direction from block to amplifier(breakdown)
1.relation between the concentration and the input concentration at different proportion betweeen the volume of the amplifier and the volume of the block.(the concentretion contains two curves,the amplifier(the output concentration) and the block)
TJU1DM009.jpg
2.relation between the concentration and the input concentration at different concentration of AIIA.(the concentretion contains two curves,the amplifier(the output concentration) and the block)
TJU1DM010.jpg
3.relation between the concentration and the input concentration at different flux.(the concentretion contains two curves,the amplifier(the output concentration) and the block)
TJU1DM011.jpg