Tokyo/Assay

From 2007.igem.org

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__NOTOC__
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= [[Tokyo/Hill function fitting |Hill function fitting ]] =
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<br>[[Tokyo/Works|Works top]]  0.[[Tokyo/Hybrid promoter|Hybrid promoter]]  1.[[Tokyo/Formulation |Formulation]]  2.[[Tokyo/Assay |Assay1]]  3.[[Tokyo/Simulation |Simulation]]  4.[[Tokyo/Assay2 |Assay2]]  5.[[Tokyo/Future works |Future works]]
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=1.Important assay =
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==[[Tokyo/Hill function fitting |Hill function fitting ]] ==
新しく作ったハイブリッドプロモーターに関してはデータがないので,実験によりパラメータを求める.
新しく作ったハイブリッドプロモーターに関してはデータがないので,実験によりパラメータを求める.
ヒル関数をfittingさせることにより,n2,n3,K2,K3が求まる.
ヒル関数をfittingさせることにより,n2,n3,K2,K3が求まる.
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導出に関してはfor more detail.
導出に関してはfor more detail.
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= [[Tokyo/Preliminary assays |Preliminary assays ]] =
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== [[Tokyo/Assays for hybrid promoter|Assays for hybrid promoter]] ==
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[[Image:AHL Assay2.JPG|thumb|200px| '''Fig.1: '''Exogenously added AHL]]
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Preliminaly assays were done
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<br>- to practice and experience the assays with AHL and IPTG
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<br>- to check if and how our materials actually worked.
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== [[Tokyo/AHL preparation |AHL preparation]] ==
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== [[Tokyo/Experimental precision and accurecy|Experimental precision and accurecy]] ==
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== [[Tokyo/AHL assay practice|AHL assay practice]] ==
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== [[Tokyo/Lux-lac hybrid promoter activation check|Lux-lac hybrid promoter activation check]] ==
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== [[Tokyo/OD correction|OD correction]] ==
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== [[Tokyo/Wash|Wash]] ==
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== [[Tokyo/New AHL check|New AHL check]] ==
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== [[Tokyo/Hybrid promoter activation & repression check|Hybrid promoter activation & repression check ]] ==
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<br>
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= [[Tokyo/Assays for hybrid promoter|Assays for hybrid promoter]] =
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These assays were done  
These assays were done  
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== [[Tokyo/Repression and activation check with LacI and AHL|Repression and activation check with LacI and AHL]] ==
== [[Tokyo/Repression and activation check with LacI and AHL|Repression and activation check with LacI and AHL]] ==
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目的
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結果
== [[Tokyo/IPTG assay|IPTG assay]] ==
== [[Tokyo/IPTG assay|IPTG assay]] ==
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目的
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結果
== [[Tokyo/Activation check by cell-produced AHL |Activation check by cell-produced AHL ]] ==
== [[Tokyo/Activation check by cell-produced AHL |Activation check by cell-produced AHL ]] ==
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目的
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結果
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=2.Preliminary assays=
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'''We conducted preliminary assays to practice experiments and check if the materials and methods worked properly.'''
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<br>[[Tokyo/Preliminary assays |See more details]]

Latest revision as of 14:06, 23 October 2007


Works top  0.Hybrid promoter  1.Formulation  2.Assay1  3.Simulation  4.Assay2  5.Future works

1.Important assay

Hill function fitting

新しく作ったハイブリッドプロモーターに関してはデータがないので,実験によりパラメータを求める. ヒル関数をfittingさせることにより,n2,n3,K2,K3が求まる. We have obtained data for our newly devised hybrid promoter. By Hill function fitting, we have determined n2, n3, K2, and K3.
Expression6-1.JPG
Expression6-2.JPG

導出に関してはfor more detail.

Assays for hybrid promoter

These assays were done
-to determine the characteristics of our hybrid promoter.
The data from here were used for computational analyses and simulations.


Repression and activation check with LacI and AHL

目的

結果

IPTG assay

目的

結果

Activation check by cell-produced AHL

目的

結果

2.Preliminary assays

We conducted preliminary assays to practice experiments and check if the materials and methods worked properly.
See more details