Berkeley LBL/KonniamNotebook
From 2007.igem.org
KonniamChan (Talk | contribs) (→Construction of pET3a-R-bchH=) |
KonniamChan (Talk | contribs) |
||
| Line 36: | Line 36: | ||
==Construction of pET3a-R-bchHI== | ==Construction of pET3a-R-bchHI== | ||
| + | 1.)PCR the gene bchI from Rhodobacter sphaeroides<br> | ||
| + | Materials: | ||
| + | *1uL R-genomic DNA | ||
| + | *10uL 5x GC buffer | ||
| + | *5uL primer | ||
| + | *0.5uL Phusion | ||
| + | *5uL DMSO | ||
| + | *27.5uL H2O | ||
| + | Conditions: | ||
| + | *98C 30s | ||
| + | *98C 10s* | ||
| + | *63C 30s* | ||
| + | *72C 1:50 min* | ||
| + | *Repeat cycles with * 29x | ||
| + | *72C 10 min | ||
| + | *4C forever | ||
| + | |||
| + | 2.)Run PCR fragments on gel to make sure they are the correct size, then PCR purify<br> | ||
| + | 3.)Digest R-bchH (8/21/07)<br> | ||
| + | *42uL PCR purified fragment | ||
| + | *5uL NEB3 | ||
| + | *1.8uL NdeI | ||
| + | *1.2uL BglII | ||
| + | 4.)Run the digested PCR fragment on gel, checking that the size is correct (8/21/07)<br> | ||
| + | 5.)Ligate R-bchH with pET3a that is already digested with NdeI and BamHI (8/21/07)<br> | ||
| + | *4.5uL pET3a | ||
| + | *12.5uL R-bchH fragment | ||
| + | *2uL T4 ligase buffer | ||
| + | *1uL T4 ligase | ||
| + | 6.)Transform into NovaBlue (8/21/07)<br> | ||
| + | 7.)Inoculate to LB media (pick 10 colonies) (8/22/07)<br> | ||
| + | 8.)Miniprep cells with pET3a-R-bchH (8/23/07)<br> | ||
| + | 9.)Sequence | ||
Revision as of 02:36, 27 October 2007
Construction of pET3A Derivatives Containing R-bchHID
Construction of pET3a-R-bchH
1.)PCR the gene bchH from Rhodobacter sphaeroides
Materials:
- 1uL R-genomic DNA
- 10uL 5x GC buffer
- 5uL primer
- 0.5uL Phusion
- 5uL DMSO
- 27.5uL H2O
Conditions:
- 98C 30s
- 98C 10s*
- 63C 30s*
- 72C 1:50 min*
- Repeat cycles with * 29x
- 72C 10 min
- 4C forever
2.)Run PCR fragments on gel to make sure they are the correct size, then PCR purify
3.)Digest R-bchH (8/21/07)
- 42uL PCR purified fragment
- 5uL NEB3
- 1.8uL NdeI
- 1.2uL BglII
4.)Run the digested PCR fragment on gel, checking that the size is correct (8/21/07)
5.)Ligate R-bchH with pET3a that is already digested with NdeI and BamHI (8/21/07)
- 4.5uL pET3a
- 12.5uL R-bchH fragment
- 2uL T4 ligase buffer
- 1uL T4 ligase
6.)Transform into NovaBlue (8/21/07)
7.)Inoculate to LB media (pick 10 colonies) (8/22/07)
8.)Miniprep cells with pET3a-R-bchH (8/23/07)
9.)Sequence
Construction of pET3a-R-bchHI
1.)PCR the gene bchI from Rhodobacter sphaeroides
Materials:
- 1uL R-genomic DNA
- 10uL 5x GC buffer
- 5uL primer
- 0.5uL Phusion
- 5uL DMSO
- 27.5uL H2O
Conditions:
- 98C 30s
- 98C 10s*
- 63C 30s*
- 72C 1:50 min*
- Repeat cycles with * 29x
- 72C 10 min
- 4C forever
2.)Run PCR fragments on gel to make sure they are the correct size, then PCR purify
3.)Digest R-bchH (8/21/07)
- 42uL PCR purified fragment
- 5uL NEB3
- 1.8uL NdeI
- 1.2uL BglII
4.)Run the digested PCR fragment on gel, checking that the size is correct (8/21/07)
5.)Ligate R-bchH with pET3a that is already digested with NdeI and BamHI (8/21/07)
- 4.5uL pET3a
- 12.5uL R-bchH fragment
- 2uL T4 ligase buffer
- 1uL T4 ligase
6.)Transform into NovaBlue (8/21/07)
7.)Inoculate to LB media (pick 10 colonies) (8/22/07)
8.)Miniprep cells with pET3a-R-bchH (8/23/07)
9.)Sequence
