Experiments

From 2007.igem.org

(Difference between revisions)
(Experiment)
 
(8 intermediate revisions not shown)
Line 1: Line 1:
-
[[Image:Ncbs_Logo.jpg|100px|right]]
+
{| cellpadding="0" cellspacing="0"
 +
|- width="37%"
 +
|align="center"|<font size="2" face="Garamond">The official wiki of the NCBS iGEM 2007 Team</font>
 +
|rowspan="3" width="62%" |[[Image:Ncbs_Logo.jpg|100px|right]]
[[Image:Ncbs.jpg|right]]
[[Image:Ncbs.jpg|right]]
-
{|width="37%"
+
|-  
-
|-
+
|align="center"|'''The NCBS iGEM 2007 Experiments'''
|align="center"|'''The NCBS iGEM 2007 Experiments'''
|-
|-
-
|align="justify"|
+
| align="justify"|<font size="2" face="Bookman Old Style">
-
<font size="2" face="Bookman Old Style">
+
The following is the record of all the experiments done by us, each followed by graphs obtained by analysis of the corresponding microscopy and flow cytometry data.
The following is the record of all the experiments done by us, each followed by graphs obtained by analysis of the corresponding microscopy and flow cytometry data.
Line 12: Line 13:
|}
|}
{| width="62%" align="right"
{| width="62%" align="right"
-
! [http://www.ncbs.res.in/ National Centre for Biological Sciences, Bangalore]
+
! align="center"|[http://www.ncbs.res.in/ National Centre for Biological Sciences, Bangalore]
|}
|}
{| style="color:#294e9c;background-color:#e1e0db;" cellpadding="3" cellspacing="1" border="1" bordercolor="#1100ff" width="62%" align="right"
{| style="color:#294e9c;background-color:#e1e0db;" cellpadding="3" cellspacing="1" border="1" bordercolor="#1100ff" width="62%" align="right"
-
![[Bangalore|Bangalore]]
+
!align="center"|[[Bangalore|Bangalore]]
-
![[The Company|The Team]]
+
!align="center"|[[The Company|The Team]]
-
![[The Mission|The Mission]]
+
!align="center"|[[The Mission|The Mission]]
-
![[Experiments|Experiments]]
+
!align="center"|[[Experiments|Experiments]]
-
![[e-Notebook|e-Notebook]]
+
!align="center"|[[e-Notebook|e-Notebook]]
|}
|}
-
 
Line 31: Line 31:
*pL.Cfp
*pL.Cfp
 +
{|
 +
|- align="justify"
 +
|[[Image:pLC_dup.png|400px]]
 +
|Details...
 +
|}
 +
*pT.luxI.Cfp
*pT.luxI.Cfp
 +
{|
 +
|- align="justify"
 +
|[[Image:pTIC_dup.png|400px]]
 +
|Details...
 +
|}
 +
*pL.luxI.Cfp
*pL.luxI.Cfp
 +
{|
 +
|- align="justify"
 +
|[[Image:pLIC_dup.png|400px]]
 +
|Details...
 +
|}
 +
*pL.luxR.Yfp
*pL.luxR.Yfp
 +
{|
 +
|- align="justify"
 +
|[[Image:pLRY_dup.png|400px]]
 +
|Details...
 +
|}
=== Open loops ===
=== Open loops ===
*pT.luxI.Cfp::pL.luxR.Yfp.pR.Cfp (0 ng/ml aTc)
*pT.luxI.Cfp::pL.luxR.Yfp.pR.Cfp (0 ng/ml aTc)
 +
{|
 +
|- align="justify"
 +
|[[Image:Openloop_0.png|400px]]
 +
|Details...
 +
|}
 +
*pT.luxI.Cfp::pL.luxR.Yfp.pR.Cfp (1 ng/ml aTc)
*pT.luxI.Cfp::pL.luxR.Yfp.pR.Cfp (1 ng/ml aTc)
 +
{|
 +
|- align="justify"
 +
|[[Image:Openloop_1.png|400px]]
 +
|Details...
 +
|}
 +
*pT.luxI.Cfp::pL.luxR.Yfp.pR.Cfp (5 ng/ml aTc)
*pT.luxI.Cfp::pL.luxR.Yfp.pR.Cfp (5 ng/ml aTc)
 +
{|
 +
|- align="justify"
 +
|[[Image:Openloop_5.png|400px]]
 +
|Details...
 +
|}
 +
*pT.luxI.Cfp::pL.luxR.Yfp.pR.Cfp (10 ng/ml aTc)
*pT.luxI.Cfp::pL.luxR.Yfp.pR.Cfp (10 ng/ml aTc)
 +
{|
 +
|- align="justify"
 +
|[[Image:Openloop_10.png|400px]]
 +
|Details...
 +
|}
 +
*pT.luxI.Cfp::pL.luxR.Yfp.pR.Cfp (20 ng/ml aTc)
*pT.luxI.Cfp::pL.luxR.Yfp.pR.Cfp (20 ng/ml aTc)
 +
{|
 +
|- align="justify"
 +
|[[Image:Openloop_20.png|400px]]
 +
|Details...
 +
|}
 +
*pT.luxI.Cfp::pL.luxR.Yfp.pR.Cfp (50 ng/ml aTc)
*pT.luxI.Cfp::pL.luxR.Yfp.pR.Cfp (50 ng/ml aTc)
 +
{|
 +
|- align="justify"
 +
|[[Image:Openloop_50.png|400px]]
 +
|Details...
 +
|}
=== Closed loops ===
=== Closed loops ===

Latest revision as of 15:51, 24 August 2007

The official wiki of the NCBS iGEM 2007 Team
Ncbs Logo.jpg
Ncbs.jpg
The NCBS iGEM 2007 Experiments

The following is the record of all the experiments done by us, each followed by graphs obtained by analysis of the corresponding microscopy and flow cytometry data.

Note that in flow cytometry a signal obtained from a filter does not exactly correspond to CFP or YFP amount inside a cell; when cells express both the proteins. This is because of spectral overlap of their excitation and emission spectra. We came up with a mathematical method to separate CFP and YFP from autofluorescence and noise. Click here for details about this mathematical tool for correction.

[http://www.ncbs.res.in/ National Centre for Biological Sciences, Bangalore]


Bangalore The Team The Mission Experiments e-Notebook


Contents

Experiment

Equivalences

  • pL.Cfp
PLC dup.png Details...
  • pT.luxI.Cfp
PTIC dup.png Details...
  • pL.luxI.Cfp
PLIC dup.png Details...
  • pL.luxR.Yfp
PLRY dup.png Details...

Open loops

  • pT.luxI.Cfp::pL.luxR.Yfp.pR.Cfp (0 ng/ml aTc)
Openloop 0.png Details...
  • pT.luxI.Cfp::pL.luxR.Yfp.pR.Cfp (1 ng/ml aTc)
Openloop 1.png Details...
  • pT.luxI.Cfp::pL.luxR.Yfp.pR.Cfp (5 ng/ml aTc)
Openloop 5.png Details...
  • pT.luxI.Cfp::pL.luxR.Yfp.pR.Cfp (10 ng/ml aTc)
Openloop 10.png Details...
  • pT.luxI.Cfp::pL.luxR.Yfp.pR.Cfp (20 ng/ml aTc)
Openloop 20.png Details...
  • pT.luxI.Cfp::pL.luxR.Yfp.pR.Cfp (50 ng/ml aTc)
Openloop 50.png Details...

Closed loops