Freiburg07/sandbox
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| + | == light sensor PhyA - Fhy1 == | ||
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| + | [[Image:PhyA_Fhy1_cycle.png|thumb|398px| PhyA - Fhy1 Interaction and light cycle]] | ||
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| + | Hiltbrunner A, Tscheuschler A, Viczian A, Kunkel T, Kircher S, Schäfer E. "FHY1 and FHL act together to mediate nuclear accumulation of the phytochrome A photoreceptor." Plant Cell Physiol. 2006 Aug;47(8):1023-34. | ||
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| + | Hiltbrunner A, Viczian A, Bury E, Tscheuschler A, Kircher S, Toth R, Honsberger A, Nagy F, Fankhauser C, Schäfer E "Nuclear accumulation of the phytochrome A photoreceptor requires FHY1." Curr Biol. 2005 Dec 6;15(23):2125-30. | ||
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| + | Gambetta GA, Lagarias JC "Genetic engineering of phytochrome biosynthesis in bacteria." Proc Natl Acad Sci U S A. 2001 Sep 11;98(19):10566-71.<br> | ||
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Latest revision as of 10:45, 23 October 2007
Reporter / Executor Part
split DHFR
Pelletier JN, Arndt KM, Plückthun A, Michnick SW. "An in vivo library-versus-library selection of optimized protein-protein interactions." Nat Biotechnol. 1999 Jul;17(7):683-90.
Pelletier JN, Campbell-Valois FX, Michnick SW. "Oligomerization domain-directed reassembly of active dihydrofolate reductase from rationally designed fragments." Proc Natl Acad Sci U S A. 1998 Oct 13;95(21):12141-6. [http://www.ncbi.nlm.nih.gov/sites/entrez?Db=pubmed&Cmd=ShowDetailView&TermToSearch=9770453&ordinalpos=5&itool=EntrezSystem2.PEntrez.Pubmed.Pubmed_ResultsPanel.Pubmed_RVDocSum pubmed]
split lactamase
Hecky J, Müller KM "Structural perturbation and compensation by directed evolution at physiological temperature leads to thermostabilization of beta-lactamase" Biochemistry. 2005 Sep 27;44(38):12640-54.
Galarneau A, Primeau M, Trudeau LE, Michnick SW "Abstract Beta-lactamase protein fragment complementation assays as in vivo and in vitro sensors of protein protein interactions." Nat Biotechnol. 2002 Jun;20(6):619-22.
CFP - YFP
Venus YFP Nagai T, Ibata K, Park ES, Kubota M, Mikoshiba K, Miyawaki A. "A variant of yellow fluorescent protein with fast and efficient maturation for cell-biological applications." Nat Biotechnol. 2002 Jan;20(1):87-90.
Cerulean CFP Rizzo MA, Springer GH, Granada B, Piston DW "An improved cyan fluorescent protein variant useful for FRET. Nat Biotechnol. 2004 Apr;22(4):445-9."
Kremers GJ, Goedhart J, van Munster EB, Gadella TW Jr "Cyan and yellow super fluorescent proteins with improved brightness, protein folding, and FRET Forster radius." Biochemistry. 2006 May 30;45(21):6570-80.
Piston DW, Kremers GJ "Fluorescent protein FRET: the good, the bad and the ugly." Trends Biochem Sci. 2007 Sep;32(9):407-14.
Malo GD, Pouwels LJ, Wang M, Weichsel A, Montfort WR, Rizzo MA, Piston DW, Wachter RM "X-ray structure of Cerulean GFP: a tryptophan-based chromophore useful for fluorescence lifetime imaging." Biochemistry. 2007 Sep 4;46(35):9865-73
Koushik SV, Chen H, Thaler C, Puhl HL 3rd, Vogel SS "Cerulean, Venus, and VenusY67C FRET reference standards." Biophys J. 2006 Dec 15;91(12):L99-L101
Ca2+ sensor Calmodulin
Calmodulin Sensor
Pham E, Chiang J, Li I, Shum W, Truong K "A computational tool for designing FRET protein biosensors by rigid-body sampling of their conformational space." Structure. 2007 May;15(5):515-23.
Truong K, Sawano A, Miyawaki A, Ikura M. "Calcium indicators based on calmodulin-fluorescent protein fusions." Methods Mol Biol. 2007;352:71-82.
Truong K, Sawano A, Mizuno H, Hama H, Tong KI, Mal TK, Miyawaki A, Ikura M. "FRET-based in vivo Ca2+ imaging by a new calmodulin-GFP fusion molecule." Nat Struct Biol. 2001 Dec;8(12):1069-73.
Reviews on calmodulin: Grabarek Z "Structural basis for diversity of the EF-hand calcium-binding proteins." J Mol Biol. 2006 Jun 9;359(3):509-25.
Soderling TR, Stull JT "Structure and regulation of calcium/calmodulin-dependent protein kinases." Chem Rev. 2001 Aug;101(8):2341-52
light sensor PhyA - Fhy1
Hiltbrunner A, Tscheuschler A, Viczian A, Kunkel T, Kircher S, Schäfer E. "FHY1 and FHL act together to mediate nuclear accumulation of the phytochrome A photoreceptor." Plant Cell Physiol. 2006 Aug;47(8):1023-34.
Hiltbrunner A, Viczian A, Bury E, Tscheuschler A, Kircher S, Toth R, Honsberger A, Nagy F, Fankhauser C, Schäfer E "Nuclear accumulation of the phytochrome A photoreceptor requires FHY1." Curr Biol. 2005 Dec 6;15(23):2125-30.
Gambetta GA, Lagarias JC "Genetic engineering of phytochrome biosynthesis in bacteria." Proc Natl Acad Sci U S A. 2001 Sep 11;98(19):10566-71.
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