Berkeley LBL/MimiSequence

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== '''Sequences and Properties of Oligonucleotides:''' ==
== '''Sequences and Properties of Oligonucleotides:''' ==

Latest revision as of 19:31, 26 October 2007

Home Project Description Methods Notebook Results and Discussion Resources


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Sequences and Properties of Oligonucleotides:

S-chlH:

         S-chlH3-kpnI-BamHI
         5' - TAA AGG ATC CAA AGG TAC CTT ATT CAA CCC CTT CAA TGC GGT CTT CC - 3'
         TM (50mM NaCL): 66.7 °C 
         GC Content: 44.7% 
         S-chlH5-ndeI  
         5' - AAT TCA TAT GAC TGC CAC CCT TGC CGC CCC CAG C - 3'
         TM (50mM NaCL): 70 °C 
         GC Content: 58.8% 

S-chlI:

         S-chlI3-speI-NotI-bglII  
         5' - TAT TAG ATC TTT AGC GGC CGC TTT ACT AGT TTA AGC TTC ATC GAC AAC GCC AAA AAC CCG - 3'
         TM (50mM NaCL): 68.4 °C 
         GC Content: 43.3% 
         S-chlI5-kpnI-rbs  
         5' - TTT AGG TAC CAA GAA GGA GAT ATA CTT ATG ACT GCC ACC CTT GCC GCC CCC AGC - 3'
         Properties TM (50mM NaCL): 70.5 °C 
         GC Content: 51.9%

S-chlD:

         S-chlD3-NotI-bglII-long
         5' - TTG AAG CCT AGG AGA AGA GTA GGG AAT TTT TTG ACC AAT TTC TAG - 3'
         TM (50mM NaCL): 63.1 °C 
         GC Content: 37.8% 
         S-chlD5-speI-rbs-long
         5' - ATT GGG AGT CAA CTT CTA CTA AAT CTT CAG AAA AAC GAT ATT TGG - 3'
         TM (50mM NaCL): 61.6 °C 
         GC Content: 33.3%