Paris/August 13
From 2007.igem.org
(Difference between revisions)
David.bikard (Talk | contribs) |
David.bikard (Talk | contribs) (→Digestions) |
||
| Line 28: | Line 28: | ||
|[[Paris/July 13| July 13]] | |[[Paris/July 13| July 13]] | ||
|- style="background: #cccccc;" | |- style="background: #cccccc;" | ||
| - | | style="background: # | + | | style="background: #FF99FF;" |D22 |
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
|<bbpart>pSB1A2</bbpart> | |<bbpart>pSB1A2</bbpart> | ||
|L6.1 (rbs-CRE) | |L6.1 (rbs-CRE) | ||
| Line 61: | Line 50: | ||
|[[Paris/July 13| July 13]] | |[[Paris/July 13| July 13]] | ||
|- style="background: #cccccc;" | |- style="background: #cccccc;" | ||
| - | | style="background: # | + | | style="background: #FF99FF;" |D42 |
|Lox66 FV | |Lox66 FV | ||
|L9 | |L9 | ||
| Line 72: | Line 61: | ||
|[[Paris/July 13| July 13]] | |[[Paris/July 13| July 13]] | ||
|- style="background: #cccccc;" | |- style="background: #cccccc;" | ||
| - | | style="background: # | + | | style="background: #FF99FF;" |D35 |
|Lox71 BV | |Lox71 BV | ||
|L10 | |L10 | ||
| Line 102: | Line 91: | ||
* 2µl Enzyme1 | * 2µl Enzyme1 | ||
* 2µl Enzyme2 | * 2µl Enzyme2 | ||
| - | |||
== Ligations == | == Ligations == | ||
Revision as of 15:48, 16 August 2007
Digestions
| Digestion Products | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Number | Product Name | Matrix Name | Enzyme 1 | Enzyme 2 | Size | Description | Product Left | []ng/µL | Date |
| D41 | araC/pBad-J61002 plasmid BV | L1.2 (araC/pBad-J61002 plasmid) | Spe1 | Pst1 | Vector with the pBAD promoter ready for insertion of a RBS/CDS insert | July 13 | |||
| D22 | pSB1A2 | L6.1 (rbs-CRE) | EcoR1 | Pst1 | July 13 | ||||
| D33 | RBS(B0030)-CreORF BI | L6.2 (rbs-CRE) | XbaI | PstI | RBS-Cre digestion for use as a BI | July 13 | |||
| D42 | Lox66 FV | L9 | EcoRI | XbaI | pSB1A2-lox66 as a Forward vector | July 13 | |||
| D35 | Lox71 BV | L10 | SpeI | PstI | pSB1A2-lox71 as a Backward vector | July 13 | |||
| D43 | gfp-tripart FI | MP8.1 | EcoRI | SpeI | gfp-tri part (strongRBS-ORF-T) ready for use as a forward insert | July 13 | |||
digestion mix:
- 25µl plasmid
- 1µl BSA
- 10 µl NEB2
- 60µl H2O
- 2µl Enzyme1
- 2µl Enzyme2
Ligations
| Ligations | ||||||
|---|---|---|---|---|---|---|
| Number | Insert | Insert Volume (µL) | Vector | Vector Volume (µL) | Comments | Number of colonies |
| C1 | MP3.1 digested with EcoRI (D0) | 2 | control of ligation efficiency | |||
| C2 | D35 (L10 lox71 dig.SP) | 2µl | control of D35 digestion | |||
| C4 | D? (L9 lox66 EX) | 2µl | control of D? digestion | |||
| L26 | D33.2 (L6.2 RBS-Cre XP) | 5 | D? (L1 J61002::pbad SP) | 1 | Insertion of RBS-Cre behind araC/pBad | |
| L27 | D27 (ftsZ PCR XP) | 5 | D? (L1 J61002::pbad SP) | 1 | Insertion of ftsZ behind araC/pBad | |
| L28 | D32 (ftsAZ PCR XP) | 5 | D? (L1 J61002::pbad SP) | 1 | Insertion of ftsAZ behind araC/pBad | |
| L29 | D? (MP8.1 gfp-tripart ES) | 5 | D? (L9 pSB1A2::lox66 XP) | 2 | Insertion of gfp-tripart in front of lox66 | |
| L30(.1 & .2) | dapAp [O31+O32]0.2µM | 2 | D9.1 & D9.2 (dapAp [O31+O32]0.2µM) | 1 | cloning dapAp promotor in J61002 | |
Ligation mix:
- 2µl 10x buffer
- 1µl Ligase
- XµL plasmid DNA solution
- YµL insert DNA solution
- H2O qsp 20µL
Reaction in 20µl
ON @ 4°C
