Template:BerkiGEM2007 SamanthaSequencingFiles

From 2007.igem.org

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|SIL131||8-14||Bca9145-I716439||1||G01001||perfect||[[BerkiGEM2007-Sequencing-SIL131 | SIL131]]
|SIL131||8-14||Bca9145-I716439||1||G01001||perfect||[[BerkiGEM2007-Sequencing-SIL131 | SIL131]]
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|-
-
|SIL132||8-14||Bca9145-I7164539||2||G01001||perfect||[[BerkiGEM2007-Sequencing-SIL132 | SIL132]]
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|SIL132||8-14||Bca9145-I716439||2||G01001||perfect||[[BerkiGEM2007-Sequencing-SIL132 | SIL132]]
|-
|-
-
|SIL133||???||???||???||???||???||[[BerkiGEM2007-Sequencing-SIL133 | SIL133]]
+
|SIL133||8-20||Bca9145-Bca1149||1||ca998||???||[[BerkiGEM2007-Sequencing-SIL133 | SIL133]]
|-
|-
-
|SIL134||???||???||???||???||???||[[BerkiGEM2007-Sequencing-SIL134 | SIL134]]
+
|SIL134||8-20||Bca9145-Bca1149||2||ca998||???||[[BerkiGEM2007-Sequencing-SIL134 | SIL134]]
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|-
-
|SIL135||???||???||???||???||???||[[BerkiGEM2007-Sequencing-SIL135 | SIL135]]
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|SIL135||8-20||Bca9145-I716445||1||ca998||???||[[BerkiGEM2007-Sequencing-SIL135 | SIL135]]
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|-
-
|SIL136||???||???||???||???||???||[[BerkiGEM2007-Sequencing-SIL136 | SIL136]]
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|SIL136||8-20||Bca9145-I716445||2||ca998||???||[[BerkiGEM2007-Sequencing-SIL136 | SIL136]]
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|-
-
|SIL137||???||???||???||???||???||[[BerkiGEM2007-Sequencing-SIL137 | SIL137]]
+
|SIL137||8-20||Bca9145-I716446||1||ca998||???||[[BerkiGEM2007-Sequencing-SIL137 | SIL137]]
|-
|-
-
|SIL138||???||???||???||???||???||[[BerkiGEM2007-Sequencing-SIL138 | SIL138]]
+
|SIL138||8-20||Bca9145-I716446||2||ca998||???||[[BerkiGEM2007-Sequencing-SIL138 | SIL138]]
|-
|-
-
|SIL139||???||???||???||???||???||[[BerkiGEM2007-Sequencing-SIL139 | SIL139]]
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|SIL139||8-20||Bca9145-I716466||1||ca998||???||[[BerkiGEM2007-Sequencing-SIL139 | SIL139]]
|-
|-
-
|SIL140||???||???||???||???||???||[[BerkiGEM2007-Sequencing-SIL140 | SIL140]]
+
|SIL140||8-20||Bca9145-I716466||2||ca998||???||[[BerkiGEM2007-Sequencing-SIL140 | SIL140]]
|-
|-
-
|SIL141||???||???||???||???||???||[[BerkiGEM2007-Sequencing-SIL141 | SIL141]]
+
|SIL141||8-20||Bca9145-I716465||1||ca998||???||[[BerkiGEM2007-Sequencing-SIL141 | SIL141]]
|-
|-
-
|SIL142||???||???||???||???||???||[[BerkiGEM2007-Sequencing-SIL142 | SIL142]]
+
|SIL142||8-20||Bca9145-I716465||2||ca998||???||[[BerkiGEM2007-Sequencing-SIL142 | SIL142]]
|-
|-
-
|SIL143||???||???||???||???||???||[[BerkiGEM2007-Sequencing-SIL143 | SIL143]]
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|SIL143||8-20||Bca9145-I716443||1||G01001||???||[[BerkiGEM2007-Sequencing-SIL143 | SIL143]]
|-
|-
-
|SIL144||???||???||???||???||???||[[BerkiGEM2007-Sequencing-SIL144 | SIL144]]
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|SIL144||8-20||Bca9145-I716444||1||G01001||???||[[BerkiGEM2007-Sequencing-SIL144 | SIL144]]
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|-
|SIL145||???||???||???||???||???||[[BerkiGEM2007-Sequencing-SIL145 | SIL145]]
|SIL145||???||???||???||???||???||[[BerkiGEM2007-Sequencing-SIL145 | SIL145]]

Revision as of 22:02, 20 August 2007

SampleDate (2007)PlasmidClonePrimerResultFile Link
SIL0016-6pBca1101-I7162011ca998wrong, nonsense SIL001
SIL0026-6pBca1101-I7162021ca998wrong SIL002
SIL0036-6pBca1101-I7162022ca998wrong SIL003
SIL0046-6pBca1101-I7162031ca998wrong SIL004
SIL0056-6pBca1101-I7162032ca998wrong SIL005
SIL0066-6pBca9145-I7162041ca998perfect SIL006
SIL0076-6pBca9145-I7162042ca998perfect SIL007
SIL0086-6pBca9145-I7162051ca998good SIL008
SIL0096-6pBca9145-I7162052ca998wrong, no terminator SIL009
SIL0106-6pBca9145-I7162061ca998perfect SIL010
SIL0116-6pBca9145-I7162062ca998perfect SIL011
SIL0126-8pBca9145-I7162071ca998perfect SIL012
SIL0136-8pBca9145-I7162072ca998good SIL013
SIL0146-8pBca9145-I7162081ca998perfect SIL014
SIL0156-8pBca9145-I7162082ca998wrong, [lox] only SIL015
SIL0166-9pBca9145-I7162091ca998good but not long enough SIL016
SIL0176-9pBca9145-I7162092ca998good but not long enough SIL017
SIL0186-9pBca9145-I7162101ca998good SIL018
SIL0196-9pBca9145-I7162102ca998perfect SIL019
SIL0206-9pBca9145-I7162111ca998good but not long enough SIL020
SIL0216-9pBca9145-I7162112ca998good but not long enough SIL021
SIL0226-9pBca9145-I7162121ca998nope, still ATG start codon SIL022
SIL0236-9pBca9145-I7162122ca998nope, still ATG start codon SIL023
SIL0246-9pBca9145-I7162131ca998good but not long enough SIL024
SIL0256-9pBca9145-I7162132ca998good but not long enough SIL025

Contents

Start 26

SIL0266-11pBca9145-I7162091G01001perfect SIL026
SIL0276-11pBca9145-I7162092G01001perfect SIL027
SIL0286-11pBca9145-I7162111G01001perfect SIL028
SIL0296-11pBca9145-I7162112G010011bp deletion SIL029
SIL0306-11pBca9145-I7162132G01001perfect SIL030
SIL0316-12pBca9145-I7162141ca998bad read SIL031
SIL0326-12pBca9145-I7162142ca998good SIL032
SIL0336-12pBca9145-I7162151ca998bad read SIL033
SIL0346-12pBca9145-I7162152ca998good SIL034
SIL0356-13pBca9145-I7162121ca998bad read SIL035
SIL0366-13pBca9145-I7162122ca998wrong - still ATG start SIL036
SIL0376-15pBca9145-I7162161ca998wrong - cassette only SIL037
SIL0386-15pBca9145-I7162201ca998perfect SIL038
SIL0396-15pBca9145-I7162211ca998perfect SIL039
SIL0406-15pBca9145-I7162221ca998perfect SIL040
SIL0416-15pBca9145-I7162231ca998wrong - missing cassette SIL041
SIL0426-19pBca9145-I7162121ca998good SIL042
SIL0436-19pBca9145-I7162162ca998perfect! finally! SIL043
SIL0446-20pBca9145-I7162162ca998bad read SIL044
SIL0456-20pBca9145-I7162163ca998bad read - only Cre though SIL045
SIL0466-20pBca9145-I7162171ca998bad read - only Cre though SIL046
SIL0476-20pBca9145-I7162172ca998weird - missing a lox site SIL047
SIL0486-20pBca9145-I7162181ca998messy but should be right SIL048
SIL0496-20pBca9145-I7162182ca998perfect SIL049
SIL0506-20pBca9145-I7162191ca998perfect SIL050

Start 51

SIL0516-20pBca9145-I7162192ca998perfect SIL051
SIL0526-20pBca9145-I7162222ca998wrong SIL052
SIL0536-20pBca9145-I7162223ca998perfect SIL053
SIL0546-20pBca9145-I7162231ca998perfect! SIL054
SIL0556-20pBca9145-I7162234ca998perfect SIL055
SIL0566-26pBca9145-I716216R1ca998no ceaB SIL056
SIL0576-26pBca9145-I716217R4ca998no ceaB SIL057
SIL0586-26pBca9145-I716217R5ca998no ceaB SIL058
SIL0596-26pBca9145-I7162241ca998perfect SIL059
SIL0606-26pBca9145-I7162252ca998perfect SIL060
SIL0616-26pBca9145-I7162263ca998perfect SIL061
SIL0627-02pBca9145-I716216ddbs4ca998possible point mutatiion SIL062
SIL0637-02pBca9145-I716217dbbs3ca998perfect SIL063
SIL0647-11pBca9145-I7164011ca998still has CamR -no pbad SIL064
SIL0657-11pBca9145-I7164021ca998perfect SIL065
SIL0667-11pBca9145-I7164031ca998perfect SIL066
SIL0677-11pBca9145-I7164041ca998perfect SIL067
SIL0687-11pBca9145-I7164051ca998perfect SIL068
SIL0697-11pBca9145-I7164061ca998looks good - but mixed template SIL069
SIL0707-11pBca9145-I7164071ca998badly mixed template SIL070
SIL0717-11pBca9145-I7164081ca998good SIL071
SIL0727-11pBca9145-I7164091ca998badly mixed template SIL072
SIL0737-11pBca9145-I7164101ca998still has CamR - no pBad SIL073
SIL0747-11pBca9145-I7164111ca998perfect SIL074
SIL0757-11pBca9145-I7164121ca998perfect SIL075

Start 76

SIL0767-11pBca9145-I7164131ca998good SIL076
SIL0777-11pBca9145-I7164141ca998good SIL077
SIL0787-11pBca9145-I7164151ca998looks good, but a little mixed read SIL078
SIL0797-17pBca9145-I7164012ca998perfect SIL079
SIL0807-17pBca9145-I7164072ca998perfect SIL080
SIL0817-17pBca9145-I7164092ca998mixed-can see part of pbad SIL081
SIL0827-17pBca9145-I7164102ca998perfect SIL082
SIL0837-17pBca9145-I7164161ca998CamR instead of pbad SIL083
SIL0847-17pBca9145-I7164171ca998good SIL084
SIL0857-17pBca9145-I7164181ca998CamR instead of pbad SIL085
SIL0867-17pBca9145-I7164191ca998CamR instead of pbad SIL086
SIL0877-17pBca9145-I7164201ca998mixed template - no match SIL087
SIL0887-17pBca9145-I7164211ca998CamR instead of pbad SIL088
SIL0897-17pBca9145-I7164221ca998perfect SIL089
SIL0907-17pBca9145-I7164224ca998perfect SIL090
SIL0917-17pBca9145-I7164231ca998perfect SIL091
SIL0927-17pBca9145-I7164233ca998perfect SIL092
SIL0937-20pBca9145-I716408C1ca998recombination SIL093
SIL0947-20pBca9145-I716408E1ca998recombination SIL094
SIL0957-20pBca9145-I716408C1G01001recombination SIL095
SIL0967-20pBca9145-I716408E1G01001recombination SIL096
SIL0977-26pBca1101-I7164362ca998weak signal SIL097
SIL0987-26pBca1101-I7164364ca998perfect SIL098
SIL0997-26pBca9145-I7164371ca998perfect SIL099
SIL1007-26pBca9145-I7164372ca998perfect SIL100

Start 101

SampleDate (2007)PlasmidClonePrimerResultFile Link
SIL1017-31Bca1101-I7164381ca998only TT SIL101
SIL1027-31Bca9145-I7164391ca998only TT SIL102
SIL1037-31Bca9145-I7164392ca998wrong SIL103
SIL1047-31Bca9145-I7164401ca998good but need G01001 too SIL104
SIL1057-31Bca9145-I7164411ca56perfect SIL105
SIL1067-31Bca9145-I7164412ca56perfect SIL106
SIL1078-3Bca1101-I7164381ca998good-needs reverse SIL107
SIL1088-3Bca1101-I7164384ca998good-needs reverse SIL108
SIL1098-3Bca9145-I7164391ca998good-needs reverse SIL109
SIL1108-3Bca9145-I7164393ca998good-needs reverse SIL110
SIL1118-3Bca9145-I7164422ca56perfect SIL111
SIL1128-3Bca9145-I7164423ca56perfect SIL112
SIL1138-7Bca9145-I7164432G01001no TT SIL113
SIL1148-7Bca9145-I7164433G01001no TT SIL114
SIL1158-7Bca9145-I7164442G01001no TT SIL115
SIL1168-7Bca9145-I7164444G01001no TT SIL116
SIL1178-7Bca9145-I7164381G01001no TT SIL117
SIL1188-7Bca9145-I7164384G01001no TT SIL118
SIL1198-7Bca9145-I7164391G01001no TT SIL119
SIL1208-7Bca9145-I7164393G01001no TT SIL120
SIL1218-7Bca9145-I7164491ca56perfect SIL121
SIL1228-7Bca9145-I7164492ca56perfect SIL122
SIL1238-7Bca9145-I7164501ca56perfect SIL123
SIL1248-7Bca9145-I7164502ca56perfect SIL124
SIL1258-7Bca9145-I7164551ca56??? SIL125

Start 126

SampleDate (2007)PlasmidClonePrimerResultFile Link
SIL1268-7Bca9145-I7164561ca56??? SIL126
SIL1278-7Bca9145-I7164571ca56??? SIL127
SIL1288-7Bca9145-I7164581ca56??? SIL128
SIL1298-14Bca9145-I7164381G01001perfect SIL129
SIL1308-14Bca9145-I7164383G01001perfect SIL130
SIL1318-14Bca9145-I7164391G01001perfect SIL131
SIL1328-14Bca9145-I7164392G01001perfect SIL132
SIL1338-20Bca9145-Bca11491ca998??? SIL133
SIL1348-20Bca9145-Bca11492ca998??? SIL134
SIL1358-20Bca9145-I7164451ca998??? SIL135
SIL1368-20Bca9145-I7164452ca998??? SIL136
SIL1378-20Bca9145-I7164461ca998??? SIL137
SIL1388-20Bca9145-I7164462ca998??? SIL138
SIL1398-20Bca9145-I7164661ca998??? SIL139
SIL1408-20Bca9145-I7164662ca998??? SIL140
SIL1418-20Bca9145-I7164651ca998??? SIL141
SIL1428-20Bca9145-I7164652ca998??? SIL142
SIL1438-20Bca9145-I7164431G01001??? SIL143
SIL1448-20Bca9145-I7164441G01001??? SIL144
SIL145??????????????? SIL145
SIL146??????????????? SIL146
SIL147??????????????? SIL147
SIL148??????????????? SIL148
SIL149??????????????? SIL149
SIL150??????????????? SIL150

Start 151

SampleDate (2007)PlasmidClonePrimerResultFile Link
SIL151??????????????? SIL151
SIL152??????????????? SIL152
SIL153??????????????? SIL153
SIL154??????????????? SIL154
SIL155??????????????? SIL155
SIL156??????????????? SIL156
SIL157??????????????? SIL157
SIL158??????????????? SIL158
SIL159??????????????? SIL159
SIL160??????????????? SIL160
SIL161??????????????? SIL161
SIL162??????????????? SIL162
SIL163??????????????? SIL163
SIL164??????????????? SIL164
SIL165??????????????? SIL165
SIL166??????????????? SIL166
SIL167??????????????? SIL167
SIL168??????????????? SIL168
SIL169??????????????? SIL169
SIL170??????????????? SIL170
SIL171??????????????? SIL171
SIL172??????????????? SIL172
SIL173??????????????? SIL173
SIL174??????????????? SIL174
SIL175??????????????? SIL175
Retrieved from "http://2007.igem.org/wiki/index.php/Template:BerkiGEM2007_SamanthaSequencingFiles"