PHO80cds
From 2007.igem.org
Gene Pho80 CODING SEQUENCE
1 ATGGAAAGCA CATCAGGAGA ACGTTCCGAA AATATACATG AGGATCAAGG
51 GATACCAAAA GTAATTCTGC CCGCTGATTT TAATAAATGC TCTAGAACTG
101 ACCTAGTGGT GCTCATATCA CGAATGTTAG TATCGCTGAT AGCAATCAAT
151 GAAAATTCAG CAACAAAGAA ATCTGATGAC CAAATTACTT TAACACGATA
201 CCATTCTAAG ATTCCTCCAA ACATATCAAT CTTCAACTAT TTCATACGAC
251 TGACAAAGTT TTCCTCTTTA GAACATTGTG TGCTTATGAC ATCACTCTAT
301 TATATCGATT TATTGCAAAC TGTGTATCCT GATTTTACGC TTAATTCGTT
351 GACTGCCCAT AGGTTTTTAT TAACAGCCAC CACAGTCGCA ACAAAAGGCT
401 TATGTGATTC GTTCTCAACA AACGCCCATT ATGCAAAAGT TGGAGGAGTA
451 CGATGTCACG AATTGAATAT ACTGGAGAAC GATTTTTTAA AGAGAGTAAA
501 CTACAGAATC ATTCCGCGGG ATCATAACAT TACGTTATGT AGTATAGAGC
551 AAAAACAGAA AAAGTTTGTC ATAGATAAAA ACGCATTAGG GTCTCTCGAT
601 TTGGATTCTT ATTCTTACGT TAATCGTCCA AAAAGTGGAT ATAATGTTCT
651 AGATAAATAC TATCGAAGAA TAGTTCAGCT GGTGGGTTCC TTTAACGCTT
701 CACCTGATAA GAGTAGAAAG GTTGATTATG TTCTCCCGCC AAATATTGAT
751 ATAGTGAGTG AAAGTGGCTC CCAAACTACT CAACTAAAGG GGTCGTCATC
801 ACCCAATTCT CACTCTTCAC AAAAGCGATA TTCTGAGGCA AAGGACGCAC
851 ATATCTATAA CAAGCGATCA AAGCCAGATT AA
XbaI cuts in 2 sites 91 and 648
Pho80cds 882 bp e 293aa
XbaI restriction sequence TCTAGA
1)91 bp position 31-32aa SR S=TCT TCC TCA TCG
R=AGA AGG
2)648 bp position 216-217-218aa VLD V=TT GTC GTA GTG
L=TTA TTG CTT CTA CTC CTG
D=GAT GAC
5'3' Frame 1
Met E S T S G E R S E N I H E D Q G I P K V I L P A D F N K C S R T D L V V L I S R Met L V S L I A I N E N S A T K K S D D Q I T L T R Y H S K I P P N I S I F N Y F I R L T K F S S L E H C V L Met T S L Y Y I D L L Q T V Y P D F T L N S L T A H R F L L T A T T V A T K G L C D S F S T N A H Y A K V G G V R C H E L N I L E N D F L K R V N Y R I I P R D H N I T L C S I E Q K Q K K F V I D K N A L G S L D L D S Y S Y V N R P K S G Y N V L D K Y Y R R I V Q L V G S F N A S P D K S R K V D Y V L P P N I D I V S E S G S Q T T Q L K G S S S P N S H S S Q K R Y S E A K D A H I Y N K R S K P D Stop
Virtual Sequence: SEQUENCE 293 AA; 33227 MW; 72918CAF845AE74C CRC64.
MESTSGERSE NIHEDQGIPK VILPADFNKC SRTDLVVLIS RMLVSLIAIN ENSATKKSDD QITLTRYHSK IPPNISIFNY FIRLTKFSSL EHCVLMTSLY YIDLLQTVYP DFTLNSLTAH RFLLTATTVA TKGLCDSFST NAHYAKVGGV RCHELNILEN DFLKRVNYRI IPRDHNITLC SIEQKQKKFV IDKNALGSLD LDSYSYVNRP KSGYNVLDKY YRRIVQLVGS FNASPDKSRK VDYVLPPNID IVSESGSQTT QLKGSSSPNS HSSQKRYSEA KDAHIYNKRS KPD
PHO80
Primer sequences:
t93c 5'-cgctgattttaataaatgctccagaactgacctagtggtgc-3'
t93c antisense 5'-gcaccactaggtcagttctggagcatttattaaaatcagcg-3'
t648c 5'-atcgtccaaaaagtggatataatgtcctagataaatactatcgaagaatag-3'
t648c antisense 5'-ctattcttcgatagtatttatctaggacattatatccactttttggacgat-3'