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| - | <div id="about">
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| - | {|
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| - | | rowspan=2 | [[Image:Berkeley.jpg|left|200px]]'''Addressable Conjugation in Bacterial Networks'''
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| - | Networks of interacting cells provide the basis for neural learning. We have developed the process of addressable conjugation for communication within a network of E. coli bacteria. Here, bacteria send messages to one another via conjugation of plasmid DNAs, but the message is only meaningful to cells with a matching address sequence. In this way, the Watson Crick base-pairing of addressing sequences replaces the spatial connectivity present in neural systems. To construct this system, we have adapted natural conjugation systems as the communication device. Information contained in the transferred plasmids is only accessable by "unlocking" the message using RNA based 'keys'. The resulting addressable conjugation process is being adapted to construct a network of NAND logic gates in bacterial cultures. Ultimately, this will allow us to develop networks of bacteria capable of trained learning. <br>
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| - | '''The presentation of our results for the 2006 Jamboree is available at the [http://parts2.mit.edu/wiki/index.php/University_of_California_Berkeley_2006 iGEM Website]'''<br>
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| - | [[Image:Microsoft_Logo.jpg|right|200 px]]
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| - | ''The Berkeley iGEM team very gratefully acknowledges the generous support of Microsoft, which helped make our team members' participation possible.''<br>
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| - | </div>
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| - | |width="200px" class="green" |
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| - | <!-- USER HEADER with edit link-->
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| - | <h3><html>
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| - | <img src="http://openwetware.org/images/b/b9/Icon_board.png" alt="Resources">
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| - | </html>Team</h3>
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| - | <hr/>
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| - | <!-- END COMMUNITY HEADER-->
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| - | '''Undergrads'''
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| - | '''Advisors'''<br>
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| - | [[John Dueber]]<br>
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| - | [http://www.openwetware.org/wiki/User:JCAnderson Christopher Anderson]<br>
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| - | [[Adam Arkin]]<br>
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| - | [[Jay Keasling]]<br>
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| - | '''Teaching Assistants'''<br>
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| - | [[Farnaz Nowroozi]]<br>
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| - | [[Amin Hajimorad]]<br>
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| - | [[Rickey Bonds]]<br>
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| - | '''Undergraduate Researchers'''<br>
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| - | [[Arthur Yu]]<br>
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| - | [[Austin Day]]<br>
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| - | [[David Tulga]]<br>
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| - | [[Kristin Doan]]<br>
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| - | [[Samantha Liang]]<br>
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| - | [[Vaibhavi Umesh]]<br>
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| - | [[Kristin Fuller]]<br>
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| - | '''High School Students'''<br>
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| - | Coming Soon!<br>
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| - | |width="360px" class="blue" |
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| - | <!-- TOOLS HEADER with edit link-->
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| - | <h3><html>
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| - | <img src="http://openwetware.org/images/e/e2/Icon_info.png" alt="News" border="0">
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| - | </html>Tools</h3>
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| - | <hr/>
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| - | <!-- END TOOLS HEADER with edit link-->
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| - |
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| - | [[lab calendar]]
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| - | '''Team Resources'''<br>
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| - | [http://spreadsheets.google.com/ccc?key=pUQEpr4ZqU9TxjeURaNm1Vw Oligo List Spreadsheet]<br>
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| - | [http://partsregistry.org/cgi/partsdb/pgroup.cgi?pgroup=iGEM2007&group=Berkeley_UC Our BioBrick Parts]<br>
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| - | [[BerkiGEM2007_AllConstructionFiles | All construction files]]<br>
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| - | [[BerkiGEM2007_AllSequencingFiles | All sequencing files]]<br>
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| - | '''Tools and Guides'''<br>
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| - | [http://www.openwetware.org/wiki/Arking:JCAOligoTutorialHome Biobricks and Cloning Tutorials]<br>
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| - | [http://pir.georgetown.edu/pirwww/search/pairwise.shtml Pairwise Alignment Online]<br>
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| - | [http://en.wikipedia.org/wiki/Help:Wikitext_examples Wiki Formatting Guide]<br>
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| - | '''Team Notebooks'''<br>
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| - | [[John Dueber Notebook]]<br>
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| - | [[Christopher Anderson Notebook]]<br>
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| - | [[Farnaz Nowroozi Notebook]]<br>
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| - | [[Amin Hajimorad Notebook]]<br>
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| - | [[Rickey Bonds Notebook]]<br>
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| - | [[Arthur Yu Notebook | Arthur Yu's 1337 Notebook]]<br>
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| - | [[Austin Day Notebook]]<br>
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| - | [[David Tulga Notebook]]<br>
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| - | [[Kristin Doan Notebook]]<br>
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| - | [[Samantha Liang Notebook]]<br>
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| - | [[Vaibhavi Umesh Notebook]]<br>
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| - | [[Kristin Fuller Notebook]]<br>
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| - | <br>
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| - | |width="200px" class="green" |
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| - | <!-- USER HEADER with edit link-->
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| - | <h3><html>
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| - | <img src="http://openwetware.org/images/b/b9/Icon_board.png" alt="Resources">
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| - | </html>Project</h3>
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| - | <hr/>
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| - | <!-- END PROJECT HEADER-->
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| - | '''Addressable Cell-to-Cell Communication'''
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| - |
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| - | *[[Media:Berkeley 2005 Jamboree.ppt| Berkeley 2005 'Jamboree']]
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| - | *[http://parts2.mit.edu/wiki/index.php/UC_Berkeley_2005 2005 Project]
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| - | *[http://partsregistry.org/cgi/partsdb/pgroup.cgi?pgroup=iGEM2006&group=Berkeley '''2006 Parts List''']
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| - | '''Useful Links'''
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| - |
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| - | *[[IGEM|iGEM]]
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| - | *[http://parts2.mit.edu/wiki/index.php/University_of_California_Berkeley_2006 UC Berkeley iGEM wiki]
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| - | *[http://parts2.mit.edu/wiki/index.php/Main_Page iGEM wiki]
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| - | *[http://partsregistry.org/Main_Page Registry of Standard Biological Parts]
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| - | *[http://parts2.mit.edu/r/parts/partsdb/pgroup.cgi?pgroup=iGEM&group=iGEM_Berkeley 2005 Biobricks]
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| - | *[[Image:iGEM2006Distribution.xls|iGEM2006 Distribution compiled list]]
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| - | *[http://parts2.mit.edu/wiki/index.php/University_of_California_Berkeley_2006 | iGEM site]
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| - | |}
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