Melbourne/Colony PCRl

From 2007.igem.org

< Melbourne(Difference between revisions)
(Method from primary and secondary reagents)
 
Line 4: Line 4:
*Time to complete protocol:
*Time to complete protocol:
-
**Lab time:    5
+
**Lab time:    5min
**Waiting time: 4hours
**Waiting time: 4hours
*Approximate cost of materials: $0.00
*Approximate cost of materials: $0.00
Line 12: Line 12:
# Take 3ul of resuspension and make an index plate.
# Take 3ul of resuspension and make an index plate.
# Take 30ul aliquot and boil at 95degrees C for 10 minutes
# Take 30ul aliquot and boil at 95degrees C for 10 minutes
-
# Use 10ul of resultant supernatant as template in PCR reaction:<BR> 1. 10ul supernatant<BR>2. 1ul forward primer<BR>3. 1ul reverse primer<BR>4. 12 ul GoTaq
+
# Use 10ul of resultant supernatant as template in PCR reaction:<BR> 1. 10ul supernatant<BR>2. 1ul forward primer<BR>3. 1ul reverse primer<BR>4. 12 ul [[Melbourne/primary GoTaq|GoTaq]]
# Use a PCR machine with the following cycles:<BR>1. 95C 10min<BR>2. (92C 1 min 54C 1min 72C 1min) X 30<BR>3. 72C 10min<BR>4. 4C hold.
# Use a PCR machine with the following cycles:<BR>1. 95C 10min<BR>2. (92C 1 min 54C 1min 72C 1min) X 30<BR>3. 72C 10min<BR>4. 4C hold.
# [[Melbourne/Loading a DNA gel|Run]] the PCR products on a gel.
# [[Melbourne/Loading a DNA gel|Run]] the PCR products on a gel.
Line 19: Line 19:
=====Primary & secondary Reagents Required including controls=====
=====Primary & secondary Reagents Required including controls=====
*[[Melbourne/primary milliq|milliQ water]]
*[[Melbourne/primary milliq|milliQ water]]
-
*GoTaq
+
*[[Melbourne/primary GoTaq|GoTaq]]
*Forward and Reverse primers  
*Forward and Reverse primers  
*Bacterial colony
*Bacterial colony

Latest revision as of 11:47, 8 October 2007

<Return to list of protocols> <Team home page>

  • Applications: Confirm presence of insert in bacterial plasmid


  • Time to complete protocol:
    • Lab time: 5min
    • Waiting time: 4hours
  • Approximate cost of materials: $0.00

Contents

Method from primary and secondary reagents

  1. Scrape a colony with a sterile pipette tip and resuspend in 50ul of milliQ water.
  2. Take 3ul of resuspension and make an index plate.
  3. Take 30ul aliquot and boil at 95degrees C for 10 minutes
  4. Use 10ul of resultant supernatant as template in PCR reaction:
    1. 10ul supernatant
    2. 1ul forward primer
    3. 1ul reverse primer
    4. 12 ul GoTaq
  5. Use a PCR machine with the following cycles:
    1. 95C 10min
    2. (92C 1 min 54C 1min 72C 1min) X 30
    3. 72C 10min
    4. 4C hold.
  6. Run the PCR products on a gel.


Primary & secondary Reagents Required including controls
Equipement Required
  • PCR machine
  • Heating block
References