Melbourne/Software

From 2007.igem.org

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*[[http://www.ncbi.nlm.nih.gov/entrez/viewer.fcgi?db=nuccore&qty=1&c_start=1&list_uids=3089519&uids=&dopt=gbwithparts&dispmax=1&sendto=|NCBI core nucleotide database for Gvp AF053765]]
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*Used for GVP component:
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*[[http://www.ncbi.nlm.nih.gov/BLAST/|BLAST]
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**[http://www.ncbi.nlm.nih.gov/entrez/viewer.fcgi?db=nuccore&qty=1&c_start=1&list_uids=3089519&uids=&dopt=gbwithparts&dispmax=1&sendto=| NCBI core nucleotide database for Gvp AF053765]
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*[[http://www.ncbi.nlm.nih.gov/gorf/gorf.html|ORF prediction]]
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**[http://www.ncbi.nlm.nih.gov/BLAST/| BLAST]
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**[http://www.ncbi.nlm.nih.gov/gorf/gorf.html| ORF prediction]
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**[http://au.expasy.org/tools/pi_tool.html| pI & MW (Expasy)]
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*Used for Blue light receptor component:
*Other usefull sites:
*Other usefull sites:
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*[[http://www.ncbi.nlm.nih.gov/BLAST/producttable.shtml| BLAST alternatives (NCBI)]]
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**[http://www.ncbi.nlm.nih.gov/BLAST/producttable.shtml| BLAST alternatives (NCBI)]
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*[[http://au.expasy.org/tools/pi_tool.html| pI & MW (Expasy)]]
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**[http://www.shigen.nig.ac.jp/ecoli/pec/index.jsp| Profiling Ecoli chromosome]
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*[[http://www.shigen.nig.ac.jp/ecoli/pec/index.jsp|profiling Ecoli chromosome]]
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**[http://chemfinder.cambridgesoft.com/| Chemfinder]
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*[[http://chemfinder.cambridgesoft.com/|Chemfinder]]
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**[http://www.ebi.ac.uk/clustalw/| Clustal W alignment]
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*[[http://www.ebi.ac.uk/clustalw/|Clustal W alignment]]
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**[http://www.sbc.su.se/~miklos/DAS/maindas.html| DAS transmembrane prediction]
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*[[http://www.sbc.su.se/~miklos/DAS/maindas.html|DAS transmembrane prediction]]
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**[http://ezproxy.lib.unimelb.edu.au/login?url=http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed| pubmed]
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*[[http://ezproxy.lib.unimelb.edu.au/login?url=http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed|pubmed]]
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**[http://au.expasy.org/| EXPASY]
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*[[http://au.expasy.org/|EXPASY]]
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** http://www.arabidopsis.org/
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*[[http://www.arabidopsis.org/]]
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** http://www.yeastgenome.org/
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*[[http://www.yeastgenome.org/]]
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**[http://www.uni-giessen.de/~gx1052/IECA/ieca.html| Ecoli database portal]
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*[[http://www.uni-giessen.de/~gx1052/IECA/ieca.html|Ecoli database portal]]
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Revision as of 05:28, 10 July 2007

  • Used for Blue light receptor component: