Tokyo/AHL assay

From 2007.igem.org

(Difference between revisions)
(Purpose:)
(Samples:)
Line 8: Line 8:
===Samples: ===
===Samples: ===
-
<br>hybrid promoter in pTrc99A  
+
<br>hybrid promoter plasmid with pTrc99A  
-
<br>hybrod promoter in pBR322  
+
<br>hybrod promoter plasmid with pBR322  
-
<br>luxR in pTrc99A  
+
<br>luxR plasmid with pTrc99A  
<br>luxR --- AHL-dependent activation confirmed  
<br>luxR --- AHL-dependent activation confirmed  
-
<br>placqi on promter-less GFP in DH5a (for pos. con.)  
+
<br>placIq on promter-less GFP in DH5a (for pos. con.)  
-
<br>promoter-less GFP in DH5a (for neg. con.)  
+
<br>promoter-less GFP in DH5a (for neg. con.)
 +
 
===Procedure: ===
===Procedure: ===
[[Image:AHL Assay2.JPG|thumb|200px| '''Fig.1: '''Exogenously added AHL]]
[[Image:AHL Assay2.JPG|thumb|200px| '''Fig.1: '''Exogenously added AHL]]

Revision as of 21:38, 24 October 2007


AHL assay

Purpose:


check how AHL activates lux-lac hybrid promoter
check how lacI represses lux-lac hybrid promoter

Samples:


hybrid promoter plasmid with pTrc99A
hybrod promoter plasmid with pBR322
luxR plasmid with pTrc99A
luxR --- AHL-dependent activation confirmed
placIq on promter-less GFP in DH5a (for pos. con.)
promoter-less GFP in DH5a (for neg. con.)

Procedure:

Fig.1: Exogenously added AHL


prepare overnight culture for each sample
make fresh culture
take 3 ul of the overinight culture into 3 ml of LB (Amp and/or Kan) in Falcon tubes.
incubate for 2 to 3 hours until the observed OD is around 1.2 (Falcon tube = 14 mm in daimeter)
add AHL & IPTG solution
[AHL]final (in 3 ml LB culture) = 10 nM
[IPTG]final (in 3 ml LB culture) = 1 mM
incubate for 2 to 3 hours
apply 150 ul of samples into 96-well plaste
FLA measurement

Result & Conclusion:


Fig.2: AHL assay graph


AND gate by AHL & IPTG
Lux-lac hybrid promoter is activated only in the presence of AHL and IPTG.