Vector choice

From 2007.igem.org

(Difference between revisions)
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Our finally vector will be YCplac22.
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Our finally vector will be YCplac22,an YC-type (centromeric) shuttle vector.
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This is a YC-type (centromeric) shuttle vector.
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'''Vector Information''':
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Vector Information:  
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'''Vector type''': plasmid
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Vector type: plasmid
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'''Size (kb): ''' 4.854
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Size (kb): 4.854
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'''Construct size (kb): ''' 4.854
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Construct size (kb): 4.854
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'''Construction:''' pUC19
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Construction: pUC19
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'''Markers:''' TRP1,  ampR
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Markers: TRP1,  ampR
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'''Features:''' insert detection: lacZ'
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Features: insert detection: lacZ'
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'''marker(s):''' TRP1, ampR
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marker(s): TRP1, ampR
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'''promoter:''' lac
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promoter: lac
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'''replicon:''' ARS1, pMB1
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replicon: ARS1, pMB1
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'''MCS:''' HindIII...EcoRI
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MCS: HindIII...EcoRI
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'''centromere:''' CEN4
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centromere: CEN4
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                     [[Image:YCplac22_map.jpg]]
                     [[Image:YCplac22_map.jpg]]
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Selected features                                                                 
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'''Selected features'''                                                                  
    
    
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lac_promoter         142 - 171
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lac_promoter                     142 - 171
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M13_pUC_rev_primer   185 - 207
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M13_pUC_rev_primer               185 - 207
   
   
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M13_reverse_primer   206 - 224
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M13_reverse_primer               206 - 224
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M13_forward20_primer 306 - 290
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M13_forward20_primer             306 - 290
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M13_pUC_fwd_primer   321 - 299
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M13_pUC_fwd_primer               321 - 299
   
   
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CEN4                 504 - 1356
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CEN4                             504 - 1356
   
   
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Orf frame 2         2740 - 2066
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Orf frame 2                       2740 - 2066
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TRP1                 2740 - 2066
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TRP1                             2740 - 2066
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AmpR_promoter       2983 - 3011
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AmpR_promoter                     2983 - 3011
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Orf frame 2         3053 - 3913
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Orf frame 2                       3053 - 3913
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Ampicillin           3053 - 3913
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Ampicillin                       3053 - 3913
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pBR322_origin        4068 - 4687 
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Unique restriction sites
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HindIII  233
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-
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PstI  249
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-
+
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SalI  251
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-
+
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XbaI  257
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-
+
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BamHI  263
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-
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SmaI  270
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-
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KpnI  276
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-
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SacI  282
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-
+
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EcoRI  284
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-
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NarI  446
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-
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SpeI  550
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-
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NheI  1801
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-
+
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BglII  1986
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-
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EcoRV  2455
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-
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PmlI  2780
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AatII  2921
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pBR322_origin                    4068 - 4687

Revision as of 20:05, 10 September 2007

Our finally vector will be YCplac22,an YC-type (centromeric) shuttle vector.

Vector Information:

Vector type: plasmid

Size (kb): 4.854

Construct size (kb): 4.854

Construction: pUC19

Markers: TRP1, ampR

Features: insert detection: lacZ'

marker(s): TRP1, ampR

promoter: lac

replicon: ARS1, pMB1

MCS: HindIII...EcoRI

centromere: CEN4

                   YCplac22 map.jpg

Selected features

lac_promoter 142 - 171

M13_pUC_rev_primer 185 - 207

M13_reverse_primer 206 - 224

M13_forward20_primer 306 - 290

M13_pUC_fwd_primer 321 - 299

CEN4 504 - 1356

Orf frame 2 2740 - 2066

TRP1 2740 - 2066

AmpR_promoter 2983 - 3011

Orf frame 2 3053 - 3913

Ampicillin 3053 - 3913

pBR322_origin 4068 - 4687