Glasgow/Wetlab/Resources

From 2007.igem.org

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Resources

Some resources we have found useful in our research.

[http://www.mbio.ncsu.edu/BioEdit/bioedit.html BioEdit] Biological sequence alignment editor
[http://www.ncbi.nlm.nih.gov/BLAST/ BLAST] Compares nucleotide or protein sequences to sequence databases and calculates the statistical significance of matches.
[http://www.ncbi.nlm.nih.gov/ NCBI] National Center fot Biotechnology Information.
[http://openwetware.org/wiki/Main_Page Open Wetware] DNA sequence analysis.
[http://www.acaclone.com/ pDRAW32] DNA sequence analysis.
[http://fokker.wi.mit.edu/primer3/input.htm Primer3] Checking primer design.
[http://www.iit-biotech.de/iit-cgi/oligo-tm.pl Primer Melting Temperatures] Calculating primer melting temperatures for DNA sequencing.
[http://rna.lundberg.gu.se/cutter2/ Webcutter 2.0] Restriction mapping.


Plasmids

Diagrams of the sequences from which we made our parts.

XylR, pu and pr inpGLTUR


Willardson et al, 1998

PGLTUR-2.PNG
DntR and pDntR


Johnson et al, 2002

DntR.PNG
pQF52


Tran et al, 1998

PQF52 2.PNG

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