NYMU Taipei/phptest

From 2007.igem.org

(Difference between revisions)
Line 22: Line 22:
     <INPUT type="text" name="CV" > concentration (ug/uL) of vector (CV)<BR>
     <INPUT type="text" name="CV" > concentration (ug/uL) of vector (CV)<BR>
     <INPUT type="text" name="VI" > volume (uL) of insert for gel separation (VI)<BR>
     <INPUT type="text" name="VI" > volume (uL) of insert for gel separation (VI)<BR>
-
     <INPUT type="text" name="L" > volume (uL) of insert for ligation (L)<BR>
+
     <INPUT type="text" name="L" > volume (uL) of insert for ligation (L)<BR>
     <input type=button value="送出" Onclick="CheckId(SI.value, SV.value, CI.value, CV.value, VI.value, L.value);">
     <input type=button value="送出" Onclick="CheckId(SI.value, SV.value, CI.value, CV.value, VI.value, L.value);">
</form>
</form>
Line 40: Line 40:
** 10X buffer (1uL)
** 10X buffer (1uL)
** ligase (1uL)
** ligase (1uL)
-
** VV + IV + water (8uL)
+
** VV + L + water (8uL)
----
----
* formula
* formula
-
** (1) 300 * SI * 3 * 10 (損失因子) / SV = CI * X * L /50
+
** (1) 300 * SI * 3 * 10 (損失因子) / SV = CI * VI * L /50
** (2) 300 ng = CV (ug/uL) * VV (uL) * 1000, VV = 0.3/CV
** (2) 300 ng = CV (ug/uL) * VV (uL) * 1000, VV = 0.3/CV
** VV (uL) is volume of vector
** VV (uL) is volume of vector
** CV (ng/uL) is concentration of vector
** CV (ng/uL) is concentration of vector

Revision as of 07:14, 16 September 2007

size (bp) of insert part (SI)
size (bp) of vector part (SV)
concentration (ug/uL) of insert (CI)
concentration (ug/uL) of vector (CV)
volume (uL) of insert for gel separation (VI)
volume (uL) of insert for ligation (L)


  • total digestion volume is 20 uL (typical)
    • enzyme 1 and enzyme 2 (1uL * 2)
    • 10X buffer (2uL)
    • BSA (2uL)
    • plasmid + ddH2O (14uL = VI + water, 1 <= VI <= 14)

  • total gel separation volume is 50 uL

  • total ligation volume is 10uL
    • vector weight is 300 ng
    • 10X buffer (1uL)
    • ligase (1uL)
    • VV + L + water (8uL)

  • formula
    • (1) 300 * SI * 3 * 10 (損失因子) / SV = CI * VI * L /50
    • (2) 300 ng = CV (ug/uL) * VV (uL) * 1000, VV = 0.3/CV
    • VV (uL) is volume of vector
    • CV (ng/uL) is concentration of vector