Paris/July 24

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Mix in a PCR tube to a beaker of boiling water and just allow the water to cool down naturally.<br>
Mix in a PCR tube to a beaker of boiling water and just allow the water to cool down naturally.<br>
More information [http://openwetware.org/wiki/Annealing_complementary_primers here]
More information [http://openwetware.org/wiki/Annealing_complementary_primers here]
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==Purification of PCR Products==
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* RBS-DapAColi = P8
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* RBS-DapASubtilis = P9
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* Lox71-FtsA-FtsZ = P10

Revision as of 10:24, 25 July 2007

Contents

Minipreps

BBa_E0422 in pSB1A2 - Clone 1&2 - MP6.1' & MP6.2'
BBa_E0241 in pSB1A2 - Clone 1 - MP7.1'
BBa_J61047 in pSB1A2 - Clone 1&2 - MP9.1' & MP9.2'

Ligation & transformation reactions

Ligations
Number Insert Insert Volume Vector Vector Volume Comments
L1 D23 (AraC/pBad promoter FI) D9 (J61002 ready for insertion of a FI)
L2 D18 (BB dig. lox66DapAE.coli) D22 (pSB1A2 Eco, Pst)
L3 D19 (BB dig. lox66DapAsubtilis) D22 (pSB1A2 Eco, Pst)

To do:

  • D23 (AraC/pBad promoter FI) in D9 (J61002 ready for insertion of a FI)
  • D18 (BB dig. lox66DapAE.coli) & D19 (BB dig. lox66DapAsubtilis) in D22 (pSB1A2 Eco, Pst)
  • D20 (Lox66-DapAE.coli BI) & D21 (lox66-DapAsubtilis BI) in D1 (pJ23100 BV) & D3 (pJ23107 BV)
  • D14 (Cre ORF) in D15 (B0030 BV)
  • D27 (Lox71-ftsZ BI) in D1 (pJ23100 BV) & D3 (pJ23107 BV)
  • lox66 (annealing O14 & O15) & lox71 (annealing O16 & O17) in D22 (pSB1A2 Eco+Pst)

Annealing of Lox66 and Lox71

Lox66 and Lox71 oligos were designed to form a double-stranded DNA. The extremities bear cohesive overhangs corresponding to digestion by EcoRI and SpeI. See oligos 14 + 15 and 16 + 17 here.

Annealing mix:

  • 8 μL of each of the concentrated primers
  • 4 μL of salt solution (10 mM NaCl)
  • 20 μL of water

Mix in a PCR tube to a beaker of boiling water and just allow the water to cool down naturally.
More information here

Purification of PCR Products

  • RBS-DapAColi = P8
  • RBS-DapASubtilis = P9
  • Lox71-FtsA-FtsZ = P10