Latest revision as of 04:30, 27 October 2007

Abstract Concept & Model Requirements Genetic_circuit Works About_our_team

Abstract

1. Concept & Model

The goal of our project is to make a bacterial society that follows Pareto's principle as an ant society does. On the other word, we try to construct a bacterial system which takes "balanced differentiation".(See more.)

1. Differentiation => 2. Worker Removal
　3. Dedifferentiation => 4.Redifferentiation

2. Requirements

Bistability and cell-cell communication are necessary to realize our model of "Balanced differentiation". (See more.)

1．Differentiation generated by mutual-inhibition circuit.
2．Cell-cell communication .

3. Genetic circuit

The genetic circuit in this project consisted of the new parts as well as BioBrick parts. (See more.)

The new parts of this year are here!!

4. Works

Our model has been sophisticated through successive combinations of wet and dry approaches. (See more.)

Wet assay

Dry simulation
Using the data from wet experiments,the guideline for the design of the model was established

5. About our team

Students
Satoru Akama | Kenichiro Iwasaki | Hiroki Kawahara | Hajime Nakatani

Advisors: Last year's member
Shotaro Ayukawa | Akio Kobayashi

Instructors
[http://www.sb.dis.titech.ac.jp/ Daisuke Kiga] | [http://www.es.dis.titech.ac.jp/ Masayuki Yamamura] | [http://nicosia.is.s.u-tokyo.ac.jp/~hagiya/ Masami Hagiya] | [http://www.sb.dis.titech.ac.jp/ Masahiko Uchiyama]

Reference

@@ Line 1: / Line 1: @@
-[[Image:homepage1.JPG]]
+<!--[[Image:homepage1.JPG]]-->
+[[Image:Tokyotech4.JPG|900px]]
 __NOTOC__
-{| cellspacing="5"
+==[[Tokyo_Tech|Abstract]]&nbsp;&nbsp;&nbsp;[[Tokyo/Model|Concept & Model]]&nbsp;&nbsp;&nbsp;[[Tokyo/Requirements |Requirements]]&nbsp;&nbsp;&nbsp;[[Tokyo/Genetic circuit|Genetic_circuit]]&nbsp;&nbsp;&nbsp;[[Tokyo/Works|Works]]&nbsp;&nbsp;&nbsp;[[Tokyo/About our team|About_our_team]]==
-|width="450px" valign="top" |
+<h1> ''' Abstract''' </h1>
-<h1> ''' 1,[[Tokyo/Project |Project]]''' </h1>
-'''[[Tokyo/Concept |Concept]]: Ant society and Pareto's principle'''
+{| cellspacing="5"
-<br>'''[[Tokyo/Model |Model ]]: Bacterial society that follows Pareto's principle'''
-[[Image:homepage3.jpg]]
-<br>'''[[Tokyo/Requirements |Requirements]]: bistability and cell-cell communication'''
-'''[[Tokyo/Genetic circuit|Genetic circuit]]: '''
-<br>[[Image:Tokyo_genetic circuit_s.jpg]]
+|width="450px" valign="top" |
+==1. [[Tokyo/Model|Concept & Model]]==
+'''The goal of our project is to make a bacterial society that follows Pareto's principle as an [[Tokyo/Concepts|ant society]] does.
+'''On the other word, we try to construct a bacterial system which takes "balanced differentiation".([[Tokyo/Model|See more.]])'''
+<br>[[Image:Defferentiation4.JPG|450px]]
+<br>'''1. Differentiation => 2. Worker Removal '''
+<br>　'''3. Dedifferentiation => 4.Redifferentiation'''
-'''[[Tokyo/simulation|Simulation using parameters from our wet experiments]]: '''
+==2. [[Tokyo/Requirements |Requirements]]==
-<br>[[Image:Tokyo_simulation_s2.jpg]]
+'''Bistability and cell-cell communication are necessary to realize our model of "Balanced differentiation". ([[Tokyo/Requirements|See more.]])'''
+<br><br><br>
-<h1>'''2,[[Tokyo/Works |Works]]'''</h1>
+'''1．Differentiation generated by mutual-inhibition circuit.'''
-<!--<h1> ''' [[Tokyo/Experiments |Experiments]]''' </h1>-->
+<!-- '''1．Bistability generated by one genetic circuit.''' -->
-<!--[[Image:homepage4.jpg]]-->
+<br>'''2．Cell-cell communication .'''
+<br>[[Image:Cellcell.JPG|450px]]
-<h4>'''[[Tokyo/Approach |Approach]]'''</h4>
-====0.Wet====
-　[[Tokyo/Hybrid promoter |New part development:Hybrid promoter]]
-====1.Dry====
-　[[Tokyo/Formulation |Formulation]]
-====2.Wet====
-　[[Tokyo/Assay |Assay]]
-====3.Dry====
-　[[Tokyo/Simulation |Simulation]]
-====4.Wet====
-　[[Tokyo/Assay |Assay]]
-====5.Future works====
+==3. [[Tokyo/Genetic circuit|Genetic circuit]]==
+'''The genetic circuit in this project consisted of [[Tokyo/Genetic circuit/the new parts|the new parts]] as well as BioBrick parts. ([[Tokyo/Genetic circuit|See more.]])'''
+<!--（木賀）biobrickがdeliverされたのは当然なのでこの単語を消去-->
+<!--ここで言いたいことはgenetic circuitの大きさと自分達が作った新しいパーツを使っているということ-->
+<br>[[Image:Geneticcurcuit.JPG|290px|left]]
+[[Image:This is the new part.JPG|150px|none]]
+<br><br>'''The new parts of this year are [[Tokyo/Genetic circuit/the new parts|here]]!!'''
 |width="450px" valign="top" |
-<h1> '''3,[[Tokyo/Achievements |Achievements ]]'''</h1>
+==4. [[Tokyo/Works|Works]]==
+'''Our model has been sophisticated through successive combinations of wet and dry approaches. ([[Tokyo/Works|See more.]])'''
-<br>[[Tokyo/Hybrid promoter |Hybrid promoter ]]
+'''<span style="color:#ff33cc;">Wet assay </span>'''
-<br>[[Tokyo/Bistability analisis|Bistability analysis]]
+<br>[[Image:hill AHL.JPG|200px]][[Image:hill IPTG.JPG|200px]]
-<br>[[Tokyo/Others |Others ]]
+'''<span style="color:#0066ff;">Dry simulation </span>'''
+'''<br>Using the data from wet experiments,the guideline for the design of the model was established'''
+<br>[[Image:Defferentiation result.JPG|450px]]
+ <!--<br>[[Image:Tokyo_simulation_s4.jpg|300px]]-->
+== 5. [[Tokyo/About our team |About our team]] ==
-<h1> '''4,[[Tokyo/About our team |About our team ]]'''</h1>
 <!--[[Image:team photo.jpg]] -->
 '''Students'''
 <br>[[Tokyo/Satoru Akama |Satoru Akama ]] | [[Tokyo/Kenichiro Iwasaki |Kenichiro Iwasaki]] | [[Tokyo/Hiroki Kawahara |Hiroki Kawahara ]] | [[Tokyo/Hajime Nakatani|Hajime Nakatani]]
 '''Advisors: Last year's member '''
-<br>[[Tokyo/Syotarou Ayukawa |Syotarou Ayukawa ]] | [[Tokyo/Akio Kobayashi|Akio Kobayashi ]]
+<br>[[Tokyo/Shotaro Ayukawa |Shotaro Ayukawa ]] | [[Tokyo/Akio Kobayashi|Akio Kobayashi ]]
 '''Instructors'''
 <br>[http://www.sb.dis.titech.ac.jp/ Daisuke Kiga] | [http://www.es.dis.titech.ac.jp/ Masayuki Yamamura] | [http://nicosia.is.s.u-tokyo.ac.jp/~hagiya/ Masami Hagiya] | [http://www.sb.dis.titech.ac.jp/ Masahiko Uchiyama]
-'''Links'''
+<br>
-[[Tokyo/sunaba |sunaba ]]
+<br>
+<br>
+== ==
+'''[[Tokyo/Reference|Reference]]'''

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