User:Macowell/Part Categories

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Revision as of 16:00, 7 August 2007

Part Categories / Types

• We could probably make our device categorization a better match to what teams are actually doing - we should be very sensitive to what they are doing device-wise during the part submission / acceptance screen and dynamically rework some of the categories.
• TK: Two Top-Level divisions Input Devices, Output Devices, and Signal Processing Devices

Part-type documentation

• Enough background and a clear enough definition of the type for teams to use the page essentially as a recipe for making more instantiations of that part of type, intentionally.

Part-type specific fields

Use this format:

Name of field : example entry

• Protein coding regions - example [http://partsregistry.org/Part:BBa_I769106 BBa_I769106]
  • EC number : [http://www.chem.qmul.ac.uk/iubmb/enzyme/EC4/2/1/101.html 4.2.1.101]
  • Genbank Accession : [http://www.ncbi.nlm.nih.gov/entrez/viewer.fcgi?db=nucleotide&val=40788116 AJ536325]
  • Genbank Accession Region : [http://www.ncbi.nlm.nih.gov/entrez/viewer.fcgi?val=40788116&from=1994&to=2824&view=gbwithparts 1994..2824]
  • Genbank G.I. : [http://www.ncbi.nlm.nih.gov/entrez/viewer.fcgi?db=nuccore&id=40788116 40788116]
  • Swissprot / [http://www.ebi.uniprot.org/uniprot-srv/uniProtView.do?proteinId=Q70V03_PSEFL&pager.offset=null Uniprot] : [http://www.expasy.org/uniprot/Q70V03 Q70V03]
  • PDB Code : [http://www.rcsb.org/pdb/explore.do?structureId=2J5I 2J5I]

• Reporters - example BBa_E0040
  • Genbank G.I. : 155662
  • Genbank Accession : M62654
  • Swissprot: P42212
  • PDB Code : 1B9C
  • Excitation wavelength : 501nm
  • Emission wavelength : 511nm