Tokyo/Works/Formulation
From 2007.igem.org
Works top 0.Hybrid promoter 1.Formulation 2.Assay1 3.Simulation 4.Assay2 5.Future works
Step1. toggle model
First, we saw the qualitative nature implied by simple dimentionless equations and found that the number of the stable points is one or two. Since our model must have A and B states, the number of its stable points should be two.
For the parameters required for this bistability, we have found that the expression rates and Hill coefficients are critical. ⇒ see more
Step2. toggle model with hybrid promoter
Factors of the hybrid promoter should be incorporated into the equations; that is, the term of the repression of toggle by LacI and that of the activation by AHL should be added. By these additions, the phase changes dependent on the amount of AHL. Lower concentration of AHL, monostable; while, higher one gives bistable. ⇒ see more
Step3. using cell-produced AHL
Now develop this system to the one with cell-produced AHL.
This time, the nullcrine is assymetric and the phaseplane is unconventionally shaped.
Here the new parameter λ is introduced whether monostalbe or bistable of the system depends on the velues of several parameters.
⇒ see more
Before(Hybrid promoter) << Formulation >> Formulation Step.1 >>>> Next(Assay1)