Template:BerkiGEM2007 AustinConstructionFiles

From 2007.igem.org

Revision as of 18:39, 2 August 2007

1128 RBS Libraries:
pBca1101-I716051 (built): Kan cassette RBS pool
pBca1101-I716052(built): Cmr cassette RBS pool

Unmutated basic parts:
9145-I716053(built): alpha HbA in 9145(biobricks 2.0 format)
9145-I716054(built): beta HbA in 9145(biobricks 2.0 format)
9145-I716055(built): AHSP in 9145(biobricks 2.0 format)

Cassette Construction Using 1128 RBS Library:
9145-I716056(built): -kan-RBS library-alpha HbA-
9145-I716057(built): -CmR-RBS library-beta HbA-
9145-I716060(built): beta-alpha cassette (with RBS libraries)

9145-I716065(built): 2X mutant -Kan-rbs-alpha Hba (L29F and V96W)
9145-I716066(built): 2X mutant -Cmr-beta Hba (Asn108Lys and Lys82Asp)
9145-I716067(built): 2X mutants -rbs library-beta-rbs library-alpha- (with RBS libraries)

9145-I716061(built): pTRC-rbs-beta-rbs-alpha
pTrc-I716069(built): 2X mutant -pTRC-rbs-2x beta-rbs-2x alpha L29F/V96W and Asn108Lys/Lys82Asp

HbA Subunit Mutant Variants:
9145-I716058(built): 1X mutant HbA alpha (L29F) AKA: I716053m29
9145-I716059(built): 1X mutant HbA beta (Asn108Lys "Presbyterian") AKA: I716054m108
9145-I716062(built): 2X mutant HbA alpha (L29F/V96W) AKA: I716053m29m96
9145-I716063(built): 2X mutant HbA beta (Asn108Lys/Lys82Asp "Providence/Presbyterian") AKA: I716054m108m82
9145-I716072(built): 1X mutant beta Hba (Lys82Asp "Providence")
9145-I716073(built): unmutated Di-alpha fusion, biobricked
9145-I716068(built): 2X mutant Di-Alpha fusion, biobricked

No Scar Rbs-Part RBS library
1103-I716064: -pCon-(no scar site)-rbs-beta-rbs-alpha

9145-I716070(built): alpha HbA-TT
9145-I716077(built): Unmutated Di-Alpha fusion - TT
9145-I716078(built): 2X mutant alpha - TT
9145-I716079(built): 2X mutant Di-alpha fusion -TT

9145-I716080(built): -rbs-(no scar)-beta
9145-I716081(built): -rbs-(no scar)-1X mutant beta (providence Lys82Asp)
9145--I716082(built): -rbs-(no scar)-2X mutant beta (providence/Presbyterian Lys82Asp/Asn108Lys)

9145-I716071(built): -rbs lib-(NO SCAR)-beta-rbs lib-(no scar)-alpha-TT
9145-I716074(built): -rbs lib-(NO SCAR)-beta 1X mutant, providence (Lys82Asp) - rbs lib-(no scar) - unmutated di-alpha-TT- (Best Yield)
9145-I716075(built): -rbs lib-(NO SCAR)-beta 2X mutant, providence (Lys82Asp) and Presbyterian (Asn108Lys)-rbs lib-(no scar) - unmutated di alpha - TT- (Best all around)
9145-I716076(built): -rbs lib-(NO SCAR)-1X mutant beta, presbyterian (Asn108Lys)-rbs lib-(no scar)-2X mutant alpha (L29F and V96W) - TT (Second best all around)

9145-I716083(built): pT7105-rbs lib-(NO SCAR)-beta-rbs lib-(no scar)-alpha-TT
9145-I716084(built): pT7105-rbs lib-(NO SCAR)-beta 1X mutant, providence (Lys82Asp) - rbs lib-(no scar) - unmutated di-alpha-TT- (Best Yield)
9145-I716085(built): pT7105-rbs lib-(NO SCAR)-beta 2X mutant, providence (Lys82Asp) and Presbyterian (Asn108Lys)-rbs lib-(no scar) - unmutated di alpha - TT- (Best all around)
9145-I716086(built): pT7105-rbs lib-(NO SCAR)-1X mutant beta, presbyterian (Asn108Lys)-rbs lib-(no scar)-2X mutant alpha (L29F and V96W) - TT (Second best all around)

petDUET stuffs beta insertion

9145-I716087(built): I716054 (unmodified beta)insertion
9145-I716088(built): I716072 (Beta providence) insertion
9145-I716089(built): I716063 (Beta providence / Presbyterian) insertion
9145-I716090(built): I716059 (Beta presbyterian) insertion

petDUET stuffs alpha and beta insertion

9145-I716091: I716053 (unmodified alpha) insertion: Final is unmodified alpha and beta in petDUET
9145-I716092: I716084 (unmodified dialpha fusion) insertion: Final is "Best Yield" Beta providence with unmodified dialpha fusion in petDUET
9145-I716093: I716084 (unmodified dialpha fusion) insertion: Final is "Best All Around" Beta providence/Presbyterian with unmodified dialpha fusion in petDUET
9145-I716094: I716062 (2X mutant alpha L29F/V96W ) insertion: Final is "Second Best All Around" Beta providence/Presbyterian with 2X alpha mutant L29F/V96W in petDUET

Multiple Cassette Construct:

9145-I716095: Unmodified hemoglobin cassette with cytochromes cassette attached
9145-I716096: Unmodified hemoglobin cassette with heme A+B cassette attached
9145-I716097: Best yield hemoglobin cassette with cytochromes cassette attached
9145-I716098: Best yield hemoglobin cassette with heme A+B cassette attached
9145-I716099: I71695 with heme cassette attached
9145-I716100: I71697 with heme cassette attached

Previously Chris' Numbers, but they're mine now!

9145-I716351:
9145-I716352:
9145-I716353:
9145-I716354:
9145-I716355:
9145-I716356:
9145-I716357:
9145-I716358:
9145-I716359:
9145-I716360:
9145-I716361: